Structure Elucidation and Biosynthesis of Microbial Polypeptides with New Posttranslational Modifications

Microcins and lantibiotics are two rapidly growing families of polypeptide antibiotics. Both are synthesized ribosomally as precursor proteins, which undergo posttranslational modifications of the amino acids serine, threonine and cysteine. These modifications result in the formation of sulfide rings, 2,3-didehydroamino acids, D-amino acids, oxazole and thiazole rings. Posttranslationally modified polypeptides are limited in their conformational space. Therefore a number of 3D structures were determined by multidimensional NMR. In cooperation with the Department of Microbiology, the biosynthesis is being investigated and new modifying enzymes are being characterized with respect to their structure and specificity. For the first time, the construction of new modified peptides proved to be possible by protein engineering. These techniques also provide the molecular tools for the development of a new anti-acne drug as well as new gyrase inhibitors.

Publications

1. N. Schnell, K.-D- Entian, U. Schneider, F. Götz, H. Zähner, R. Kellner, and G. Jung (1988).
Prepeptide Sequence of Epidermin, a Ribosomally Synthesized Polypeptide Antibiotic Containing four Sulphide-Rings, Nature 333, 276-278.

2. R. Kellner, G. Jung, M. Josten, C. Kaletta, K.-D. Entian, and H.-G. Sahl (1989).
Pep5: Strukturaufklärung eines großen Lantibioticums, Angew. Chem. 101, 618-621; Angew. Chem. Int. Ed. Engl. 28, 616-619.

3. G. Jung (1991).
Lantibiotica, Ribosomal Synthetisierte Polypeptid-Wirkstoffe mit Sul- fidbrücken und a,b-Didehydroaminosäuren, Angew. Chem. 103, 1067-1084; Angew. Chem. Int. Ed. Engl. 30, 1051-1068.

4. G. Jung and H.-G. Sahl (1991) (eds.).
Nisin und Novel Lantibiotics, 490 pp., Escom, Leiden.

5. N. Zimmermann, S. Freund, A. Fredenhagen, and G. Jung (1993).
Solution Structures of the Lantibiotics Duramycin B and C, Eur. J. Biochem. 216, 419-428.

6. A. Bayer, S. Freund, G. Nicholson und G. Jung (1993).
Posttranslationale Backbone-Modifikation unter Bildung heteroaromatischer Fünfringe bei der Biosynthese des glycinreichen Antibiotikums Microcin B17, Angew. Chem. 105, 1410-1413; Angew. Chem. Int. Ed. Engl.32, 1336- 1339.

7. M. Skaugen, J. Nissen-Meyer, G. Jung, S. Stevanovic┤, K.Sletten, C.I. Mortvedt Abildgaard, and I.F. Nes (1994).
In vivo Conversion of L-Serine to D-Alanine in a Ribosomally Synthesized Polypeptide, J. Biol. Chem. 269, 27183-27185.

8. T. Kupke, C. Kempter, V. Gnau, G. Jung, and F. Götz (1994).
Mass Spectrometric Analysis of a Novel Enzymatic Reaction: Oxidative Decarboxylation of the Lantibiotic Precursor Peptide EpiA Catalyzed by the Flavoprotein EpiD, J. Biol. Chem. 269, 5653-5659.

9. R. Jack, A. Carne, J. Metzger, S. Freund, H.-G. Sahl, G. Jung, and J. Tagg (1994).
Elucidation of the Primary Structure of SA-FF22, a Lanthionine-Containing Antibacterial Peptide Produced by Streptococcus pyogenes , Eur. J. Biochem. 220, 455-462.

10. A. Bayer, S. Freund, and G. Jung (1995).
Post-translational Heterocyclic Backbone Modifications in the 43-Peptide Antibiotic Microcin B17, Structure Elucidation and NMR Study of a 13 C, 15 N-labelled Gyrase Inhibitor, Eur. J. Biochem.234, 414- 426.

11. T. Kupke, C. Kempter, G. Jung, and F. Götz (1995).
Oxidative Decarboxylation of Peptides Catalyzed by Flavoprotein Epi D: Determination of Substrate Specificity Using Peptide Libraries and Neutral Loss Mass Spectrometry, J. Biol. Chem. 270, 11282-11289.

12. B.Ottenwälder, T. Kupke, S. Brecht, V. Gnau, J. Metzger, G. Jung, and F. Götz (1995).
Isolation and Characterization of Genetically Engineered Gallidermin and Epidermin Analogs, Appl. Environ. Microbiol. 61, 3894-3903.

13. O. Potterat, H. Stephan, J.W. Metzger, V. Gnau, H. Zähner, and G. Jung (1994).
Aborycin - a Tricyclic 21-Peptide Antibiotic Isolated from Streptomyces griseoflavus, Liebigs Ann. Chem. 1994, 741-743.

14. N. Zimmermann, J.W. Metzger, and G. Jung (1995).
The Tetracyclic Lantibiotic Actagardine, 1 H-NMR and 13 C-NMR Assignments and Revised Primary Structure, Eur. J. Biochem., 228, 786-797.

15. F.J.M. van de Ven and G. Jung (1996).
Structures of Lantibiotics Studied by NMR, Anthonie van Leeuwenhoek J. Microbiol. 69, 99-107.

16. O.P. Knipers, G. Bierbaum, B. Ottenwälder, H.M. Dodd, N. Horn, J.W. Metzger, T. Kupke, V. Gnau, R. Bongers, P. van den Bogaard, K. Kosters, H.S. Rollema, W. M. de Vos, R.J. Siezen, G. Jung, F. Götz, H.-G. Sahl, and M.J. Gasson (1996)
Protein Engineering of Lantibiotics, Antonie van Leeuwenhoek J. Microbiol. 69, 161-170.

17. C. Kempter, T. Kupke, D. Kaiser, J.W. Metzger, and G. Jung (1996)
Thioenols from Peptidyl-cysteines: Oxidative Decarboxylation of a 13 C-Labeled Substrate, Angew. Chem. 108, 2235-2238; Angew. Chem. Int. Ed. Engl. 35, 2104-2107.

18. G. Videnov, D. Kaiser, C. Kempter, M. Brooks, and G. Jung (1996)
Synthesis of the DNA Gyrase Inhibitor Microcin B17, a 43-Peptide Antibiotic with Eight Heteroaromatic Rings in the Backbone, Angew. Chem. 108,1607-1609; Angew. Chem. Int. Ed. Engl. 35,1506-1508.

19. G. Videnov, D. Kaiser, C. Kempter, and G. Jung (1996)
Synthesis of Naturally Occuring, Conformationally Restricted Oxazole and Thiazole Containing Di- and Tripeptide Mimetics, Angew. Chem. 108, 1604-1607; Angew. Chem. Int. Ed. Engl. 35, 1503-1506.

20. G. Bierbaum, C. Szekat, M. Josten, C. Heidrich, C. Kempter, G. Jung, and H.-G. Sahl (1996)
Engineering of a Novel Thioether Bridge and Role of Modified Residues in the LAntibiotic Pep5, Appl. Environm. Microbiol. 62, 385-392.

21. G. Fimland, O.R. Blingsmo, K. Sletten, G. Jung, I.F. Nes, and J. Nissen-Meyer (1996)
New Biologically Active Hybrid Bacteriocins Constructed by Combining Regions from Various Pediocin-like Bacteriocins: The C-Terminal Region is Important for Determining Specificity Appl. Environm. Microbiol. 62, 3313-3318.

22. N. Zimmermann and G. Jung (1997)
The Three-dimensional Solution Structure of the Lantibiotic Murein-Biosynthesis Inhibitor Actagardine Determined by NMR, Eur. J. Biochem. 246, 809-819.

23. A.M. Israil, R. Jack, G. Jung, and H.-G. Sahl (1996)
Isolation of a New Epidermin Variant from two Strains of Staphylococcus epidermidis - Frequency of Lantibiotic Production in Coagulase-negative Staphylococci Zbl. Bakt. 284, 285-296.

24. R. Jack, F. Götz, and G. Jung (1997)
Lantibiotics, in: H.-J. Rehm and G. Reed (eds.), Biotechnology, Vol. 7, Chapter 8, pp. 323-368, Verlag Chemie, Weinheim

cojinfo@uni-tuebingen.de(cojinfo@uni-tuebingen.de) - July 23, 1997